Demonstrations & Tutorials

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Software Tutorials

Zemax Tutorial: File:Zemax Tutorial V03.docx

Backpropagation tutorial, with C++ code http://slslab.org/backprop.html

Demonstrations

Two Photon Microscopy

Two Photon Microscopy with Che-Hang Yu and Spencer LaVere Smith

Building a two-photon microscope is easy: File:2p is Easy.pdf


Parts List: File:Partlist 2P.xlsx

Fourier Optics

Fourier Optics with Che-Hang Yu and Spencer LaVere Smith

Fourier Transform references:

http://www.thefouriertransform.com/

https://en.wikipedia.org/wiki/Fourier_transform


Video References:

https://www.youtube.com/watch?v=spUNpyF58BY

https://www.youtube.com/watch?v=1JnayXHhjlg

https://www.youtube.com/watch?v=xhO8iz2qCOE


Fourier Transform and Deep Learning Algorithms:

https://www.sciencedaily.com/releases/2019/08/190829101101.htm

https://innovate.ee.ucla.edu/wp-content/uploads/2018/07/2018-optical-ml-neural-network.pdf


Parts List: File:Partlist FO.xlsx

Adaptive Optics

Adaptive Optics with Che-Hang Yu and Spencer LaVere Smith

Additional reference: Na Ji- Adaptive optics enables new optical microscopy for neuro applications https://www.youtube.com/watch?v=dsMOLCmLgf0


Parts List: File:Partlist AO.xlsx

Aberration correction using adaptive optics (deformable mirror)

Aberration correction using adaptive optics with Che-Hang Yu

Deformable mirror used: https://www.thorlabs.com/newgrouppage9.cfm?objectgroup_id=3258


Funding

We would like to recognize the National Science Foundation (NSF) for generously funding the NeuroNex Technology Hub: Nemonic (Next generation Multiphoton Neuroimaging Consortium) (1934288; formerly 1707287) https://neuronex.org/

https://www.nsf.gov/awardsearch/showAward?AWD_ID=1934288