Difference between revisions of "Workshops"

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Image:Nico_Pegard.jpg|Nico Pegard, UNC Chapel Hill
 
Image:Nico_Pegard.jpg|Nico Pegard, UNC Chapel Hill
 
Image:Rick.jpg|Rick Ayer, Sutter Instrument
 
Image:Rick.jpg|Rick Ayer, Sutter Instrument
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Image:Emily_Gibson.jpg|Emily Gibson, UC Denver
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Image:Emily_Gibson.jpg|Emily Gibson, CU Denver
 
Image:Andrea.png|Andrea Giovannucci, UNC Chapel Hill
 
Image:Andrea.png|Andrea Giovannucci, UNC Chapel Hill
 
Image:Simon.jpg|Simon Schultz, Imperial college London
 
Image:Simon.jpg|Simon Schultz, Imperial college London
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==2020 Videos==
 
==2020 Videos==
  
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The link below contains the recorded talks for our 2020 workshop.
 
  
  
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[https://ucsb.box.com/s/ofgwxrv0n2dwnb284zrmyoapbnzzfbmv]
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== 2020 Workshop Slideshows ==
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{{#ev:youtube|https://youtu.be/UNSTEdjJZEU|640|left}}
  
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[https://www.dropbox.com/s/lw5zpzhuvtb0y7k/Schultz%20slides%20Neuronex%202020.pdf?dl=0|Multiphoton imaging of hippocampal place cell network activity in mouse models of neurodegenerative disease - Simon Schultz]
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[https://drive.google.com/file/d/1SOMoVpL8QR2k_om3BXadlJlyT3lIdbMg/view?usp=sharing|Open Platforms for Two- and Three-Photon Microscopy - Rick Ayer]
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<br clear=all>
  
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[https://www.dropbox.com/s/09s1gnf89cm90pb/2020_02_26_Nemonic%20copy.key?dl=0|Fast and scalable brain imaging data at single-cell resolution - Andrea Giovannucci]
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==2020 Workshop Slideshows==
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[https://www.dropbox.com/s/lw5zpzhuvtb0y7k/Schultz%20slides%20Neuronex%202020.pdf?dl=0| Multiphoton imaging of hippocampal place cell network activity in mouse models of neurodegenerative disease - Simon Schultz]
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[https://drive.google.com/file/d/1SOMoVpL8QR2k_om3BXadlJlyT3lIdbMg/view?usp=sharing| Open Platforms for Two- and Three-Photon Microscopy - Rick Ayer]
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[https://www.dropbox.com/s/09s1gnf89cm90pb/2020_02_26_Nemonic%20copy.key?dl=0| Fast and scalable brain imaging data at single-cell resolution - Andrea Giovannucci]
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[https://www.dropbox.com/s/63lvmxaiwjmk8wh/Nemonic%20Seminar.pptx?dl=0| 3D-SHOT with Computer Generated Holography at high speed and with high performance - Nicolas Pegard]
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[https://drive.google.com/file/d/1d65jhaoFW_MPfu-MVc6T8Qll35RUdudB/view?usp=sharing| Advances in two-dimensional spatial frequency modulation imaging - Jeff Squier]
  
 
==2020 Related Resources==
 
==2020 Related Resources==
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Image:Nico_Pegard.jpg|Nico Pegard, UNC Chapel Hill
 
Image:Nico_Pegard.jpg|Nico Pegard, UNC Chapel Hill
 
Image:Darcy_Peterka.jpg|Darcy Peterka, Columbia
 
Image:Darcy_Peterka.jpg|Darcy Peterka, Columbia
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Image:Emily_Gibson.jpg|Emily Gibson, UC Denver
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Image:Emily_Gibson.jpg|Emily Gibson, CU Denver
 
Image:Andrea.png|Andrea Giovannucci, UNC Chapel Hill
 
Image:Andrea.png|Andrea Giovannucci, UNC Chapel Hill
 
Image:Simon.jpg|Simon Schultz, Imperial college London
 
Image:Simon.jpg|Simon Schultz, Imperial college London
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[https://drive.google.com/file/d/1Cr_jK-VSmIBfMrZjOpeZcNOnEt5SqqZM/view?usp=sharing| Darcy Peterka's 2019 Nemonic workshop talk - Darcy Peterka]
 
[https://drive.google.com/file/d/1Cr_jK-VSmIBfMrZjOpeZcNOnEt5SqqZM/view?usp=sharing| Darcy Peterka's 2019 Nemonic workshop talk - Darcy Peterka]
  
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== 2019 Related Papers and Files==
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== 2019 Related Resources==
  
 
CaImAn: an open source tool for scalable calcium imaging data analysis[https://elifesciences.org/articles/38173]
 
CaImAn: an open source tool for scalable calcium imaging data analysis[https://elifesciences.org/articles/38173]
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Building a two-photon microscope is easy[https://drive.google.com/file/d/1geiUITveydNTSxz2lFEHyazqjx9XdjUE/view?usp=sharing]
 
Building a two-photon microscope is easy[https://drive.google.com/file/d/1geiUITveydNTSxz2lFEHyazqjx9XdjUE/view?usp=sharing]
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2019 Nemonic workshop schedule[https://drive.google.com/file/d/1lYX4XBZvLDpHrfMXJJIaZzYkoZC4xmuf/view?usp=sharing]
 
  
 
== See Also ==
 
== See Also ==

Revision as of 10:03, 31 March 2020


The Nemonic project holds a yearly workshops at UC Santa Barbara to help train personnel from other institutions on how to create and use novel multiphoton neuroimaging instrumentation developed by the Nemonic consortium.

2020 Speakers

  • Jeff Squier, Colorado School of Mines

  • Nico Pegard, UNC Chapel Hill

  • Rick Ayer, Sutter Instrument

  • Emily Gibson, CU Denver

  • Andrea Giovannucci, UNC Chapel Hill

  • Simon Schultz, Imperial college London

  • Spencer Smith, UC Santa Barbara


2020 Videos





2020 Workshop Slideshows

Multiphoton imaging of hippocampal place cell network activity in mouse models of neurodegenerative disease - Simon Schultz

Open Platforms for Two- and Three-Photon Microscopy - Rick Ayer

Fast and scalable brain imaging data at single-cell resolution - Andrea Giovannucci

3D-SHOT with Computer Generated Holography at high speed and with high performance - Nicolas Pegard

Advances in two-dimensional spatial frequency modulation imaging - Jeff Squier

2020 Related Resources

https://www.youtube.com/watch?v=DLTaqzz8hJM&feature=youtu.be

2019 Speakers

  • Kaspar Podgorski, Janelia Research Campus

  • Nico Pegard, UNC Chapel Hill

  • Darcy Peterka, Columbia

  • Emily Gibson, CU Denver

  • Andrea Giovannucci, UNC Chapel Hill

  • Simon Schultz, Imperial college London

  • Spencer Smith, UC Santa Barbara


2019 Workshop Slideshows

Fast and scalable calcium imaging data analysis with CaImAn - Andrea Giovannucci

From Holography to 3D-SHOT Multiphoton whole-cell photostimulation in 3D With single neuron resolution and millisecond precision - Nico Pegard

Robotically automated, two-photon targeted patch clamp physiology - Simon Schultz

High Speed Two-Photon Tomography - Kaspar Podgorski

Extending multiphoton microscopy to 3D brain imaging in freely moving mice - Emily Gibson

Darcy Peterka's 2019 Nemonic workshop talk - Darcy Peterka

2019 Related Resources

CaImAn: an open source tool for scalable calcium imaging data analysis[1]

Robotic Automation of In Vivo Two-Photon Targeted Whole-Cell Patch-Clamp Electrophysiology[2]

Progress in automating patch clamp cellular physiology[3]

ABLE: An Activity-Based Level Set Segmentation Algorithm for Two-Photon Calcium Imaging Data[4]

High speed functional imaging with source localized multifocal two-photon microscopy[5]

Building a two-photon microscope is easy[6]

See Also

Big Brain


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